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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
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HOW TO USE
tRNA gene List
viral fraction from Arctic Ocean
HIT:
106 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>ENV08000189
ABLY01004374
viral fraction from Arctic Ocean
106
16
-
Ser
GCT
[ENA]
¡û
>ENV08000190
ABLY01005772
viral fraction from Arctic Ocean
41
116
+
Glu
CTC
[ENA]
¡û
>ENV08000191
ABLY01006142
viral fraction from Arctic Ocean
106
32
-
Met
CAT
[ENA]
¡û
>ENV08000192
ABLY01006851
viral fraction from Arctic Ocean
7
81
+
Glu
CTC
[ENA]
¡û
>ENV08000193
ABLY01008133
viral fraction from Arctic Ocean
32
106
+
Gly
GCC
[ENA]
¡û
>ENV08000194
ABLY01008725
viral fraction from Arctic Ocean
90
16
-
Met
CAT
[ENA]
¡û
>ENV08000195
ABLY01009177
viral fraction from Arctic Ocean
106
21
-
Leu
TAG
[ENA]
¡û
>ENV08000196
ABLY01009661
viral fraction from Arctic Ocean
34
108
+
Met
CAT
[ENA]
¡û
>ENV08000197
ABLY01010577
viral fraction from Arctic Ocean
84
10
-
Met
CAT
[ENA]
¡û
>ENV08000198
ABLY01011081
viral fraction from Arctic Ocean
5
89
+
Leu
GAG
[ENA]
¡û
>ENV08000199
ABLY01011392
viral fraction from Arctic Ocean
17
91
+
Gly
GCC
[ENA]
¡û
>ENV08000200
ABLY01012757
viral fraction from Arctic Ocean
122
46
-
His
GTG
[ENA]
¡û
>ENV08000201
ABLY01013147
viral fraction from Arctic Ocean
5
89
+
Leu
GAG
[ENA]
¡û
>ENV08000202
ABLY01013484
viral fraction from Arctic Ocean
16
105
+
Ser
TGA
[ENA]
¡û
>ENV08000203
ABLY01015074
viral fraction from Arctic Ocean
44
117
+
Glu
CTC
[ENA]
¡û
>ENV08000204
ABLY01016215
viral fraction from Arctic Ocean
120
44
-
Asn
GTT
[ENA]
¡û
>ENV08000205
ABLY01016752
viral fraction from Arctic Ocean
92
7
-
Tyr
GTA
[ENA]
¡û
>ENV08000206
ABLY01017261
viral fraction from Arctic Ocean
116
32
-
Leu
GAG
[ENA]
¡û
>ENV08000207
ABLY01017607
viral fraction from Arctic Ocean
32
109
+
Pro
TGG
[ENA]
¡û
>ENV08000208
ABLY01018499
viral fraction from Arctic Ocean
31
104
+
Gly
GCC
[ENA]
¡û
>ENV08000209
ABLY01019581
viral fraction from Arctic Ocean
92
16
-
Pro
GGG
[ENA]
¡û
>ENV08000210
ABLY01019860
viral fraction from Arctic Ocean
44
117
+
Glu
CTC
[ENA]
¡û
>ENV08000211
ABLY01020673
viral fraction from Arctic Ocean
33
109
+
Glu
TTC
[ENA]
¡û
>ENV08000212
ABLY01021448
viral fraction from Arctic Ocean
117
29
-
Ser
TGA
[ENA]
¡û
>ENV08000213
ABLY01021901
viral fraction from Arctic Ocean
39
115
+
Glu
TTC
[ENA]
¡û
>ENV08000214
ABLY01028681
viral fraction from Arctic Ocean
7
99
+
Ser
GCT
[ENA]
¡û
>ENV08000215
ABLY01028919
viral fraction from Arctic Ocean
30
113
+
Tyr
GTA
[ENA]
¡û
>ENV08000216
ABLY01029316
viral fraction from Arctic Ocean
115
38
-
Ile
GAT
[ENA]
¡û
>ENV08000217
ABLY01029963
viral fraction from Arctic Ocean
83
7
-
His
GTG
[ENA]
¡û
>ENV08000218
ABLY01031638
viral fraction from Arctic Ocean
95
19
-
Met
CAT
[ENA]
¡û
>ENV08000219
ABLY01034329
viral fraction from Arctic Ocean
7
98
+
Ser
GCT
[ENA]
¡û
>ENV08000220
ABLY01035503
viral fraction from Arctic Ocean
86
3
-
Leu
GAG
[ENA]
¡û
>ENV08000221
ABLY01035535
viral fraction from Arctic Ocean
88
4
-
Leu
TAG
[ENA]
¡û
>ENV08000222
ABLY01037914
viral fraction from Arctic Ocean
10
101
+
Ser
GCT
[ENA]
¡û
>ENV08000223
ABLY01045394
viral fraction from Arctic Ocean
95
19
-
Met
CAT
[ENA]
¡û
>ENV08000224
ABLY01046124
viral fraction from Arctic Ocean
85
13
-
Gln
CTG
[ENA]
¡û
>ENV08000225
ABLY01047206
viral fraction from Arctic Ocean
81
7
-
Glu
TTC
[ENA]
¡û
>ENV08000226
ABLY01050397
viral fraction from Arctic Ocean
114
29
-
Tyr
GTA
[ENA]
¡û
>ENV08000227
ABLY01052187
viral fraction from Arctic Ocean
109
33
-
His
GTG
[ENA]
¡û
>ENV08000228
ABLY01056792
viral fraction from Arctic Ocean
101
25
-
Met
CAT
[ENA]
¡û
>ENV08000229
ABLY01057472
viral fraction from Arctic Ocean
17
91
+
Asn
GTT
[ENA]
¡û
>ENV08000230
ABLY01060314
viral fraction from Arctic Ocean
12
96
+
Leu
TAG
[ENA]
¡û
>ENV08000231
ABLY01060823
viral fraction from Arctic Ocean
37
111
+
Arg
ACG
[ENA]
¡û
>ENV08000232
ABLY01061262
viral fraction from Arctic Ocean
10
95
+
Leu
CAA
[ENA]
¡û
>ENV08000233
ABLY01066080
viral fraction from Arctic Ocean
28
104
+
Met
CAT
[ENA]
¡û
>ENV08000234
ABLY01066364
viral fraction from Arctic Ocean
109
20
-
Ser
CGA
[ENA]
¡û
>ENV08000235
ABLY01066773
viral fraction from Arctic Ocean
95
19
-
Met
CAT
[ENA]
¡û
>ENV08000236
ABLY01067189
viral fraction from Arctic Ocean
93
16
-
Asp
GTC
[ENA]
¡û
>ENV08000237
ABLY01067597
viral fraction from Arctic Ocean
91
15
-
Pro
TGG
[ENA]
¡û
>ENV08000238
ABLY01068716
viral fraction from Arctic Ocean
86
12
-
Val
GAC
[ENA]
¡û
>ENV08000239
ABLY01074590
viral fraction from Arctic Ocean
82
8
-
Val
CAC
[ENA]
¡û
>ENV08000240
ABLY01075526
viral fraction from Arctic Ocean
108
32
-
His
GTG
[ENA]
¡û
>ENV08000241
ABLY01077527
viral fraction from Arctic Ocean
109
19
-
Ser
CGA
[ENA]
¡û
>ENV08000242
ABLY01079110
viral fraction from Arctic Ocean
99
24
-
Trp
CCA
[ENA]
¡û
>ENV08000243
ABLY01080187
viral fraction from Arctic Ocean
6
82
+
Met
CAT
[ENA]
¡û
>ENV08000244
ABLY01082302
viral fraction from Arctic Ocean
111
35
-
Asp
GTC
[ENA]
¡û
>ENV08000245
ABLY01083888
viral fraction from Arctic Ocean
84
8
-
Phe
GAA
[ENA]
¡û
>ENV08000246
ABLY01085835
viral fraction from Arctic Ocean
5
94
+
Leu
GAG
[ENA]
¡û
>ENV08000247
ABLY01087039
viral fraction from Arctic Ocean
31
107
+
Met
CAT
[ENA]
¡û
>ENV08000248
ABLY01091511
viral fraction from Arctic Ocean
110
20
-
Ser
GGA
[ENA]
¡û
>ENV08000249
ABLY01092055
viral fraction from Arctic Ocean
108
24
-
Leu
CAA
[ENA]
¡û
>ENV08000250
ABLY01097880
viral fraction from Arctic Ocean
101
25
-
Ile
GAT
[ENA]
¡û
>ENV08000251
ABLY01103192
viral fraction from Arctic Ocean
85
9
-
Met
CAT
[ENA]
¡û
>ENV08000252
ABLY01116268
viral fraction from Arctic Ocean
88
2
-
Leu
GAG
[ENA]
¡û
>ENV08000253
ABLY01120107
viral fraction from Arctic Ocean
94
20
-
Glu
CTC
[ENA]
¡û
>ENV08000254
ABLY01124683
viral fraction from Arctic Ocean
99
23
-
Met
CAT
[ENA]
¡û
>ENV08000255
ABLY01128340
viral fraction from Arctic Ocean
86
12
-
Val
GAC
[ENA]
¡û
>ENV08000256
ABLY01129059
viral fraction from Arctic Ocean
95
19
-
Ile
GAT
[ENA]
¡û
>ENV08000257
ABLY01131685
viral fraction from Arctic Ocean
20
93
+
Val
GAC
[ENA]
¡û
>ENV08000258
ABLY01133537
viral fraction from Arctic Ocean
12
87
+
Val
TAC
[ENA]
¡û
>ENV08000259
ABLY01133988
viral fraction from Arctic Ocean
17
107
+
Ser
GGA
[ENA]
¡û
>ENV08000260
ABLY01135534
viral fraction from Arctic Ocean
95
6
-
Ser
CGA
[ENA]
¡û
>ENV08000261
ABLY01138217
viral fraction from Arctic Ocean
12
88
+
Arg
ACG
[ENA]
¡û
>ENV08000262
ABLY01138807
viral fraction from Arctic Ocean
76
1
-
Met
CAT
[ENA]
¡û
>ENV08000263
ABLY01140631
viral fraction from Arctic Ocean
1
85
+
Leu
CAA
[ENA]
¡û
>ENV08000264
ABLY01142982
viral fraction from Arctic Ocean
92
16
-
Asp
GTC
[ENA]
¡û
>ENV08000265
ABLY01145095
viral fraction from Arctic Ocean
11
86
+
Ala
TGC
[ENA]
¡û
>ENV08000266
ABLY01145935
viral fraction from Arctic Ocean
24
99
+
Pro
CGG
[ENA]
¡û
>ENV08000267
ABLY01148272
viral fraction from Arctic Ocean
91
1
-
Ser
CGA
[ENA]
¡û
>ENV08000268
ABLY01154052
viral fraction from Arctic Ocean
12
88
+
Arg
ACG
[ENA]
¡û
>ENV08000269
ABLY01160531
viral fraction from Arctic Ocean
81
5
-
Pro
TGG
[ENA]
¡û
>ENV08000270
ABLY01172828
viral fraction from Arctic Ocean
102
27
-
Ala
TGC
[ENA]
¡û
>ENV08000271
ABLY01183981
viral fraction from Arctic Ocean
106
31
-
Lys
TTT
[ENA]
¡û
>ENV08000272
ABLY01184289
viral fraction from Arctic Ocean
81
5
-
Arg
CCG
[ENA]
¡û
>ENV08000273
ABLY01184815
viral fraction from Arctic Ocean
95
19
-
Ile
GAT
[ENA]
¡û
>ENV08000274
ABLY01186921
viral fraction from Arctic Ocean
24
97
+
Gly
TCC
[ENA]
¡û
>ENV08000275
ABLY01198221
viral fraction from Arctic Ocean
76
1
-
Arg
CCG
[ENA]
¡û
>ENV08000276
ABLY01198852
viral fraction from Arctic Ocean
104
28
-
Arg
CCT
[ENA]
¡û
>ENV08000277
ABLY01200531
viral fraction from Arctic Ocean
86
12
-
Gly
CCC
[ENA]
¡û
>ENV08000278
ABLY01212536
viral fraction from Arctic Ocean
11
86
+
Thr
CGT
[ENA]
¡û
>ENV08000279
ABLY01218029
viral fraction from Arctic Ocean
81
5
-
Asp
GTC
[ENA]
¡û
>ENV08000280
ABLY01239500
viral fraction from Arctic Ocean
94
22
-
Cys
GCA
[ENA]
¡û
>ENV08000281
ABLY01254180
viral fraction from Arctic Ocean
96
20
-
Ile
GAT
[ENA]
¡û
>ENV08000282
ABLY01278416
viral fraction from Arctic Ocean
87
14
-
Gly
TCC
[ENA]
¡û
>ENV08000283
ABLY01306724
viral fraction from Arctic Ocean
3
79
+
Arg
CCT
[ENA]
¡û
>ENV08000284
ABLY01323333
viral fraction from Arctic Ocean
85
10
-
Val
TAC
[ENA]
¡û
>ENV08000285
ABLY01359300
viral fraction from Arctic Ocean
23
99
+
Pro
TGG
[ENA]
¡û
>ENV08000286
ABLY01359616
viral fraction from Arctic Ocean
98
23
-
Lys
CTT
[ENA]
¡û
>ENV08000287
ABLY01419787
viral fraction from Arctic Ocean
17
92
+
Ala
CGC
[ENA]
¡û
>ENV08000288
ABLY01430801
viral fraction from Arctic Ocean
82
7
-
Val
TAC
[ENA]
¡û
>ENV08000289
ABLY01446229
viral fraction from Arctic Ocean
4
76
+
Thr
GGT
[ENA]
¡û
>ENV08000290
ABLY01478496
viral fraction from Arctic Ocean
80
5
-
Lys
CTT
[ENA]
¡û
>ENV08000291
ABLY01533313
viral fraction from Arctic Ocean
79
5
-
Thr
GGT
[ENA]
¡û
>ENV08000292
ABLY01539987
viral fraction from Arctic Ocean
85
10
-
Lys
CTT
[ENA]
¡û
>ENV08000293
ABLY01584954
viral fraction from Arctic Ocean
2
77
+
Ala
GGC
[ENA]
¡û
>ENV08000294
ABLY01589105
viral fraction from Arctic Ocean
6
82
+
Pro
TGG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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